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1. You need to create a Custom Group that contains the VM's in question:
-You can add them explicitly to the group by name, or use a dynamic filter based on other factors, like the parent folder or cluster, or even the operating system, I believe.
-Click the preview button (lower left - custom group dialog) to test your new group and see if it contains the members you're looking for.
2. Then you need to create a Sub-Policy off your standard policy, that disables the alerts you don't want to see, then apply it to that Custom Group.
For our setup, I have created a group of VMs that are descendants of a special cluster that don't want to see alerts for, then created an ALERTS-OFF policy and applied it to the custom group.