I am having some issues patching my vcenter server from 6.5.0u3 to 6.5.0u3o ... I am running the update from an iso file using the command software-package install --iso and it mounts the iso, stages the patches and I go through accepting the terms and conditions and then it fails with no warning message. I tried updating from the appliance manager with the same results.
A couple of notes..
This is an isolated system without access to the internet
I reset the root password on the appliance prior to attempting to patch
I attempted patching to multiple other versions besides the 6.5u3o but all gave the same results
I am not sure if this is related but the /storage/logs directory was out of disk space and giving errors in the appliance manager... prior to attempting the patch I increased the disk space and expanded the disk, the errors went away
I have this from the logs but I am not sure how to proceed:
error: error(-30986) getting "libpthread.so.0(GLIBC_2.2.5)(64bit)" records from Requirename index: BDB0075 DB_PAGE_NOTFOUND: Requested page not found
error: Failed dependencies:
libjson-c.so.2()(64bit) is needed by (installed) rsyslog-8.15.0-9.ph1.x86_64
libgcc = 5.3.0-5.ph1 is needed by (installed) libstdc++-5.3.0-5.ph1.x86_64
openssl = 1.0.2r-1.ph1 is needed by (installed) openssl-c_rehash-1.0.2r-1.ph1.x86_64