Thanks Srinivas.
Reading up on the JRE license, it appears the JRE can be distributed, so long as it is unmodified and purpose is to make the app run - not just a repackaging of the JRE.
I actually am not concerned about my coding. I am just unclear if VMware is requiring the source code be made available on everything[/b] that is included in the VM, because I don't know if the source code for the JRE is even available. And I seriously doubt it'd be available for Flash/Shockwave players.