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Answer to your first query on linux vCenter :
vCenter Server Appliance: Linux VC capability
Hosts (with embedded vPostgres database) 100
Virtual machines (with embedded vPostgres database) 3000
Hosts (with Oracle database) 1000
Virtual machines (with Oracle database) 10000
Ref:http://www.vmware.com/pdf/vsphere5/r55/vsphere-55-configuration-maximums.pdf
If you install new vCenter from scratch ie. 5.x. you can add your ESXi 4.1 host to it but you will lose all vCenter settings/configuration from earlier vCenter.
You need to configure everything from scratch on new VC
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Thanks & Regards
Vikas, VCP70, MCTS on AD, SCJP6.0, VCF, vSphere with Tanzu specialist.
https://vThinkBeyondVM.com/about
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Disclaimer: Any views or opinions expressed here are strictly my own. I am solely responsible for all content published here. Content published here is not read, reviewed or approved in advance by VMware and does not necessarily represent or reflect the views or opinions of VMware.