Are these VMs? You only need to install VMware Tools on a VM guest. If you are talking about macOS VMs...
Since you manage a large number of devices running macOS, is it safe to assume you are using some sort of management platform (i.e. JAMF)? Usually those tools allow you to create a software whitelist, and even a portal for users to install the software from. I would recommend adding VMware Tools to that portal.