I remember that document in regards to micro-segmentation, what memories it brings back.
I'm not sure what you are after. VMware recommends following the industry best practices and your physical switch vendors best practices.
Generally, you will take one or more physical interfaces, add them to a vSwitch on a host or hosts, then create a portgroup for each VLAN. The physical interfaces will have to be trunk ports, and wither or not to use a native VLAN is up to you, but I generally don't like to do that because the management console can use VLAN tagging so no need to allow untagged traffic at all.
Now, this is just a general suggestion, only add the VLANs to the physical interface trunk that you will actually use. You can add all VLANs, but every VLAN is a L2 segment, and every L2 segment your host sees from the physical interface, wither you have a portgroup or not, will receive the broadcast traffic of that L2 segment. So by adding all VLANs, and if you have a lot, and only need a few, you can flood the hosts interfaces with unnecessary broadcast traffic.
