Hi,
mmh I dont know exactly. Install each in a separate directory You need to configure two different ports for each Agent instance. One the websphere one, you may disable every unnecessary plugin. I'm pretty sure that you can connect to two different servers
But I don't know if a single HQ server can handle two agent instances from the same host because I'm not sure how HQ server seperates hosts. There are several values like IP adress and so on.
Cheers,
Mirko